huex.variantexons       package:oneChannelGUI       R Documentation

_t_a_b_l_e _l_i_n_k_i_n_g _e_x_o_n-_l_e_v_e_l _p_r_o_b_e _s_e_t _i_d_s _t_o _v_a_r_i_a_n_t _e_x_o_n_s

_D_e_s_c_r_i_p_t_i_o_n:

     The table is made integrating exon-level netaffx annotaiton with
     UCSC derived annotation. Specifically exon-level rpobesets are
     mapped on variant exons, i.e. those that are specific of only a
     subset of all isoforms associated to a gene. This table is used to
     filter differentially expressed exons to select only those
     associated to variant isoforms

_U_s_a_g_e:

     huex.variantexons

_F_o_r_m_a_t:

     A data frame with 12 observations: affyname, affystart, affyend,
     affywidth, affystrand, vspname, vspstart, vspend,
     vspwidth,vspstrand,chr,genome

_R_e_f_e_r_e_n_c_e_s:

     Affymetrix web site and UCSC database

