\HeaderA{lumi-package}{A package for preprocessing Illumina microarray data}{lumi.Rdash.package}
\aliasA{lumi}{lumi-package}{lumi}
\keyword{package}{lumi-package}
\begin{Description}\relax
lumi R package is designed to preprocess the Illumina microarray (BeadArray) data. It includes functions of Illumina data input, quality control, variance stabilization, normalization and gene annotation.
\end{Description}
\begin{Details}\relax
\Tabular{ll}{
Package: & lumi\\
Type: & Package\\
Version: & 1.1.0\\
Date: & 2007-03-23\\
License: &  LGPL version 2 or newer \\
}
\end{Details}
\begin{Author}\relax
Pan Du, Simon Lin
Maintainer: Pan Du \textless{}dupan@northwestern.edu\textgreater{}
\end{Author}
\begin{References}\relax
1. Du, P., Kibbe, W.A. and Lin, S.M., (2008) 'lumi: a pipeline for processing Illumina microarray', Bioinformatics 24(13):1547-1548

2. Lin, S.M., Du, P., Kibbe, W.A., (2008) 'Model-based  Variance-stabilizing Transformation for Illumina Microarray Data', Nucleic Acids Res. 36, e11

3. Du, P., Kibbe, W.A. and Lin, S.M., (2007) 'nuID: A universal naming schema of oligonucleotides for Illumina, Affymetrix, and other microarrays', Biology Direct, 2, 16
\end{References}

