imageCodelink            package:codelink            R Documentation

_I_m_a_g_e _p_l_o_t _o_f _C_o_d_e_l_i_n_k _a_r_r_a_y_s

_D_e_s_c_r_i_p_t_i_o_n:

     Plot and image of a Codelink array if the layout information is
     found.

_U_s_a_g_e:

     imageCodelink(object, array = 1, what = "bg",
         low="black", high="white", mar=c(1,1,1,1),
         gr=1, gc=1, log.it=FALSE, ...)
             

_A_r_g_u_m_e_n_t_s:

  object: an object of class "Codelink".

   array: array to be used.

    what: with data plot: bg, smean, ri, ni.

     low: color used for low intensities.

    high: color used for high intensities-

     mar: character vector specifiying margings.

      gc: numerical; number of grid columns.

      gr: numerical; number of grid rows.

  log.it: logical; if TRUE data is log2 transformed (if not yet).

     ...: additional arguments passed to image.

_A_u_t_h_o_r(_s):

     Diego Diez

_E_x_a_m_p_l_e_s:

     ## Not run: 
         data(codelink.example)
         imageCodelink(codelink.example)
     ## End(Not run)

