cutCV                package:codelink                R Documentation

_C_a_l_c_u_l_a_t_e _c_u_t_o_f_f _b_a_s_e_d _i_n _C_V.

_D_e_s_c_r_i_p_t_i_o_n:

     Takes a Codelink object and calculate cutoff based in CV.

_U_s_a_g_e:

             cutCV(object, subset=c(1:dim(object)[2]))

_A_r_g_u_m_e_n_t_s:

  object: an object of class "Codelink".

  subset: subset of arrays to calculate cutoff with

_D_e_t_a_i_l_s:

     First it computes the median of CV for each gene over all arrays.
     Then it computes the mean and sd of all medians. Finally:

     cutoff = mean + 3 * sd

_A_u_t_h_o_r(_s):

     Diego Diez

_E_x_a_m_p_l_e_s:

     ## Not run: 
         # data: Normalized Codelink object merged.
         cutoff <- cutCV(data)
     ## End(Not run)

