AtongFnDomain {SLGI} | R Documentation

## The functional domains shared by the tested pairs in Tong et al experiment.

### Description

Data developed from Tong et. al. buffering experiments.

### Usage

    data(AtongFnDomain)

### Format

A list containing 3 items.

pairs
  Dataframe of all the gene pairs and their synthetic lethality status.
SharedPfam
  List of the Pfam domains shared by each pair. The order of this list is the same as the order of the pairs.
SharedSMART
  List of the SMART domains shared by each pair. The order of this list is also the same as the order of the pairs.

### Author(s)

Z. Jiang

### Source

Created from the association matrix reported by Tong et al. and the Pfam (Protein family database http://pfam.janelia.org/) and SMART database of yeast.

### References

Global Mapping of the Yeast Genetic Interaction Network, Tong et al, Science Vol.303, 2004 Saccharomyces Genome Database

### Examples

    data(AtongFnDomain)
    names(AtongFnDomain)

[Package SLGI version 1.4.0 Index]