AtongFnDomain              package:SLGI              R Documentation

_T_h_e _f_u_n_c_t_i_o_n_a_l _d_o_m_a_i_n_s _s_h_a_r_e_d _b_y _t_h_e _t_e_s_t_e_d _p_a_i_r_s _i_n _T_o_n_g _e_t _a_l _e_x_p_e_r_i_m_e_n_t.

_D_e_s_c_r_i_p_t_i_o_n:

     Data developed from Tong et. al. buffering experiments.

_U_s_a_g_e:

     data(AtongFnDomain)

_F_o_r_m_a_t:

     A list containing 3 items.

     _p_a_i_r_s Dataframe of all the gene pairs and their synthetic
          lethality status. 

     _S_h_a_r_e_d_P_f_a_m List of the Pfam domains shared by each pair. The order
          of this list is the same as the order of the pairs.

     _S_h_a_r_e_d_S_M_A_R_T List of the SMART domains shared by each pair. The
          order of this list is also the same as the order of the
          pairs.

_A_u_t_h_o_r(_s):

     Z. Jiang

_S_o_u_r_c_e:

     Created from the association matrix reported by Tong et al. and
     the Pfam (Protein family database <URL: http://pfam.janelia.org/>)
     and SMART database of yeast.

_R_e_f_e_r_e_n_c_e_s:

     Global Mapping of the Yeast Genetic Interaction Network, Tong et
     al, Science Vol.303, 2004 Saccharomyces Genome Database

_E_x_a_m_p_l_e_s:

     data(AtongFnDomain)
     names(AtongFnDomain)

