plot                 package:PCpheno                 R Documentation

_G_r_a_p_h_i_c_a_l _m_e_t_h_o_d _t_o _r_e_p_r_e_s_e_n_t _t_h_e _r_e_s_u_l_t _o_f _t_h_e _d_e_n_s_i_t_y _o_r _g_r_a_p_h _t_e_s_t.

_D_e_s_c_r_i_p_t_i_o_n:

     a plot method for 'deResult' and 'gtResult' objects.

_U_s_a_g_e:

     ## S4 method for signature 'deResult':
     plot(x,...)
     ## S4 method for signature 'gtResult':
     plot(x,...)

_A_r_g_u_m_e_n_t_s:

       x: the 'deResult' or 'gtResult' object to plot.

     ...: general commands to be sent to plot.

_D_e_t_a_i_l_s:

     The plot generated from a 'deResult' object is a set of density
     plots.

     The plot generated from a 'gtResult' object is a histogram.

_A_u_t_h_o_r(_s):

     N. LeMeur

_S_e_e _A_l_s_o:

     _ScISI_

_E_x_a_m_p_l_e_s:

     data(ScISI)
     data(essglist)
     essential <- names(essglist)
     ScISI <- as.matrix(ScISI)
     ratio<- densityEstimate(genename=essential,interactome=ScISI,perm=50)
     plot(ratio)

