\HeaderA{qscore.arrayCGH}{arrayCGH quality score}{qscore.arrayCGH}
\keyword{misc}{qscore.arrayCGH}
\begin{Description}\relax
Computes a quality score for a given arrayCGH.
\end{Description}
\begin{Usage}
\begin{verbatim}qscore.arrayCGH(qscore, arrayCGH)\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{qscore}] an object of type \code{\LinkA{qscore}{qscore}}.
\item[\code{arrayCGH}] an object of type \code{arrayCGH}.
\end{ldescription}
\end{Arguments}
\begin{Value}
A numeric value.
\end{Value}
\begin{Note}\relax
People interested in tools for array-CGH analysis can
visit our web-page: \url{http://bioinfo.curie.fr}.
\end{Note}
\begin{Author}\relax
Pierre Neuvial, \email{manor@curie.fr}.
\end{Author}
\begin{SeeAlso}\relax
\code{\LinkA{qscore}{qscore}}, \code{\LinkA{qscore.summary}{qscore.summary}}
\end{SeeAlso}
\begin{Examples}
\begin{ExampleCode}
data(qscores)
data(spatial)

## compute a quality score for a couple of arrays: signal smoothness
qscore.arrayCGH(smoothness.qscore, edge.norm)
qscore.arrayCGH(smoothness.qscore, gradient.norm)
\end{ExampleCode}
\end{Examples}

