qscore.arrayCGH            package:MANOR            R Documentation

_a_r_r_a_y_C_G_H _q_u_a_l_i_t_y _s_c_o_r_e

_D_e_s_c_r_i_p_t_i_o_n:

     Computes a quality score for a given arrayCGH.

_U_s_a_g_e:

     qscore.arrayCGH(qscore, arrayCGH)

_A_r_g_u_m_e_n_t_s:

  qscore: an object of type 'qscore'.

arrayCGH: an object of type 'arrayCGH'.

_V_a_l_u_e:

     A numeric value.

_N_o_t_e:

     People interested in tools for array-CGH analysis can visit our
     web-page: <URL: http://bioinfo.curie.fr>.

_A_u_t_h_o_r(_s):

     Pierre Neuvial, manor@curie.fr.

_S_e_e _A_l_s_o:

     'qscore', 'qscore.summary'

_E_x_a_m_p_l_e_s:

     data(qscores)
     data(spatial)

     ## compute a quality score for a couple of arrays: signal smoothness
     qscore.arrayCGH(smoothness.qscore, edge.norm)
     qscore.arrayCGH(smoothness.qscore, gradient.norm)

