mRNAclusters             package:GraphAT             R Documentation

_Y_e_a_s_t _m_R_N_A _E_x_p_r_e_s_s_i_o_n _D_a_t_a _C_l_u_s_t_e_r _M_e_m_b_e_r_s_h_i_p_s

_D_e_s_c_r_i_p_t_i_o_n:

     This data set contains cluster membership for yeast genes
     clustered using mRNA expression from a microarray experiment in
     Causton, et al. Molecular Biology of the Cell (2001). The 3000
     most variable genes were clustered using k-means with 30 clusters.

_U_s_a_g_e:

     data(mRNAclusters)

_F_o_r_m_a_t:

     A data frame whose rows are the 3000 genes and whose two columns
     are gene name and cluster membership number.

_S_o_u_r_c_e:

     <URL: http://web.wi.mit.edu/young/environment>

_R_e_f_e_r_e_n_c_e_s:

     Causton, H. C. et al. 2001 ``Remodeling of Yeast Genome Expression
     in Response to Environmental Changes.'' Molecular Biology of the
     Cell *12*, 323-337.

_E_x_a_m_p_l_e_s:

     data(mRNAclusters)

     ## Compute the adjacency matrix for the corresponding cluster graph:
     mRNAMat<-clust2Mat(mRNAclusters[,2])

