WiltingData             package:CGHbase             R Documentation

_C_e_r_v_i_c_a_l _c_a_n_c_e_r _a_r_r_a_y_C_G_H _d_a_t_a

_D_e_s_c_r_i_p_t_i_o_n:

     A dataframe containing 4709 rows and 8 columns with arrayCGH data.

_U_s_a_g_e:

     Wilting

_F_o_r_m_a_t:

     A dataframe containing the following 8 columns:


     _N_a_m_e The unique identifiers of array elements.

     _C_h_r_o_m_o_s_o_m_e Chromosome number of each array element.

     _P_o_s_i_t_i_o_n Chromosomal position in bp of each array element.

     _A_d_C_A_1_0 Raw log2 ratios for cervical cancer sample AdCA10.

     _S_C_C_2_7 Raw log2 ratios for cervical cancer sample SCC27.

     _S_C_C_3_2 Raw log2 ratios for cervical cancer sample SCC32.

     _S_C_C_3_6 Raw log2 ratios for cervical cancer sample SCC36.

     _S_C_C_3_9 Raw log2 ratios for cervical cancer sample SCC39.

_S_o_u_r_c_e:

     Wilting, S.M., Snijders, P.J., Meijer, G.A., Ylstra, B., van den
     IJssel, P.R., Snijders, A.M., Albertson, D.G., Coffa, J.,
     Schouten, J.P., van de Wiel, M.A., Meijer, C.J., & Steenbergen,
     R.D. (2006). Increased gene copy numbers at chromosome 20q are
     frequent in both squamous cell carcinomas and adenocarcinomas of
     the cervix. _Journal of Pathology, 210_, 258-259.

