Affymetrix Human Gene 1.0-ST Array annotation data (chip hugene10st)


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Documentation for package ‘hugene10st.db’ version 1.0.2

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hugene10st Bioconductor annotation data package
hugene10stACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
hugene10stALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hugene10stCHR Map Manufacturer IDs to Chromosomes
hugene10stCHRLENGTHS A named vector for the length of each of the chromosomes
hugene10stCHRLOC Map Manufacturer IDs to Chromosomal Location
hugene10stENSEMBL Map Ensembl gene acession numbers with Entrez Gene identifiers
hugene10stENSEMBL2PROBE Map Ensembl gene acession numbers with Entrez Gene identifiers
hugene10stENTREZID Map between Manufacturer Identifiers and Entrez Gene
hugene10stENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene10stENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hugene10stGENENAME Map between Manufacturer IDs and Genes
hugene10stGO Map between Manufacturer IDs and Gene Ontology (GO)
hugene10stGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hugene10stGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hugene10stLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hugene10stMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hugene10stMAPCOUNTS Number of mapped keys for the maps in package hugene10st.db
hugene10stOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hugene10stORGANISM The Organism for hugene10st
hugene10stPATH Mappings between probe identifiers and KEGG pathway identifiers
hugene10stPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hugene10stPFAM Map Manufacturer IDs to Pfam IDs
hugene10stPMID Map between Manufacturer Identifiers and PubMed Identifiers
hugene10stPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hugene10stPROSITE Map Manufacturer IDs to PROSITE ID
hugene10stREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hugene10stSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hugene10stUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hugene10st_dbconn Collect information about the package annotation DB
hugene10st_dbfile Collect information about the package annotation DB
hugene10st_dbInfo Collect information about the package annotation DB
hugene10st_dbschema Collect information about the package annotation DB