logRatios              package:Neve2006              R Documentation

_e_x_t_r_a_c_t_o_r _f_o_r _c_g_h_S_e_t _a_s_s_a_y _d_a_t_a

_D_e_s_c_r_i_p_t_i_o_n:

     extractor for cghSet assay data

_U_s_a_g_e:

     logRatios(cghSet)

_A_r_g_u_m_e_n_t_s:

  cghSet: instance of cghSet class

_D_e_t_a_i_l_s:

     gets the AssayData element

_V_a_l_u_e:

     matrix

_A_u_t_h_o_r(_s):

     Vince Carey <stvjc@channing.harvard.edu>

_E_x_a_m_p_l_e_s:

     data(neveCGHmatch)
     logRatios(neveCGHmatch)[1:4,1:4]

