Package: safe
Title: Significance Analysis of Function and Expression
Version: 3.4.0
Author: William T. Barry
Description: SAFE is a resampling-based method for testing functional categories in gene expression experiments. SAFE can be applied to 2-sample and multi-class comparisons, or simple linear regressions. Other experimental designs can also be accommodated through user-defined functions.
Depends: R (>= 2.4.0), AnnotationDbi, Biobase, methods, SparseM
Suggests: GO.db, KEGG.db, PFAM.db, reactome.db, hgu133a.db,
        breastCancerUPP, survival, foreach, doRNG, Rgraphviz, GOstats
Maintainer: William T. Barry <bbarry@jimmy.harvard.edu>
License: GPL (>= 2)
biocViews: GeneExpression, FunctionalAnnotation
Packaged: 2014-04-12 08:48:38 UTC; biocbuild
Built: R 3.1.0; ; 2014-04-12 16:53:37 UTC; windows
