citHeader("Please cite the Bioinformatics paper for the software itself and the other papers for the various original statistical methods implemented in Repitools.")

citEntry(
   entry="article",
   title = "Repitools: an R package for the analysis of enrichment-based epigenomic data",
   author = "Statham AL, Strbenac D, Coolen MW, Stirzaker C, Clark SJ, Robinson MD",
   journal = "Bioinformatics",
   volume = 26,
   pages = 1662-3,
   year = 2010,
   textVersion = "Statham AL, Strbenac D, Coolen MW, Stirzaker C, Clark SJ, Robinson MD. (2010). Repitools: an R package for the analysis of enrichment-based epigenomic data, Bioinformatics 26(13), 1662-3"
)

citEntry(
   entry="article",
   title = "Copy-number-aware differential analysis of quantitative DNA sequencing data",
   author = "Robinson MD, Strbenac D, Stirzaker C, Statham AL, Song J, Speed TP, Clark SJ",
   journal = "Genome Research",
   volume = 22,
   pages = 2489-96,
   year = 2012,
   textVersion = "Robinson MD, Strbenac D, Stirzaker C, Statham AL, Song J, Speed TP, Clark SJ (2012). Copy-number-aware differential analysis of quantitative DNA sequencing data. Genome Research 22(12):2489-96."
)

citEntry(
   entry="article",
   title = "BayMeth: Improved DNA methylation quantification for affinity capture sequencing data using a flexible Bayesian approach",
   author = "Riebler A, Menigatti M, Song JZ, Statham AL, Stirzaker C, Mahmud N, Mein CA, Clark SJ, Robinson MD",
   journal = "arXiv:1312.3115",
   year = 2013,
   textVersion = "Riebler A, Menigatti M, Song JZ, Statham AL, Stirzaker C, Mahmud N, Mein CA, Clark SJ, Robinson MD (2013). BayMeth: Improved DNA methylation quantification for affinity capture sequencing data using a flexible Bayesian approach, arXiv:1312.3115."
)
