Package: GSCA
Type: Package
Title: GSCA: Gene Set Context Analysis
Version: 1.0.0
Date: 2014-4-10
Author: Zhicheng Ji, Hongkai Ji
Maintainer: Zhicheng Ji <zji4@jhu.edu>
Description: GSCA takes as input several lists of activated and
        repressed genes. GSCA then searches through a compendium of
        publicly available gene expression profiles for biological
        contexts that are enriched with a specified pattern of gene
        expression. GSCA provides both traditional R functions and
        interactive, user-friendly user interface.
License: GPL(>=2)
LazyLoad: yes
Imports: graphics
Depends: shiny, sp, gplots, ggplot2, reshape2, RColorBrewer, rhdf5
Suggests: Affyhgu133aExpr, Affymoe4302Expr, Affyhgu133A2Expr,
        Affyhgu133Plus2Expr
biocViews: GeneExpression, Visualization, GUI
Packaged: 2014-04-30 05:23:03 UTC; biocbuild
Built: R 3.1.0; ; 2014-04-30 08:34:18 UTC; windows
