Package: ChAMP
Type: Package
Title: Chip Analysis Methylation Pipeline for Illumina
        HumanMethylation450
Version: 1.2.8
Date: 2014-09-10
Author: Tiffany Morris, Lee Butcher, Andy Feber, Andrew Teschendorff,
        Ankur Chakravarthy and Stephan Beck
Maintainer: Tiffany Morris <Tiffany.Morris@ucl.ac.uk>
Description: The package includes quality control metrics, a selection
        of normalization methods and novel methods to identify
        differentially methylated regions and to highlight copy number
        aberrations.
License: GPL-3
Depends: R (>= 3.0.1), minfi, ChAMPdata, Illumina450ProbeVariants.db
Imports: sva, IlluminaHumanMethylation450kmanifest, limma, RPMM,
        DNAcopy, preprocessCore, impute, marray, wateRmelon, plyr
biocViews: Microarray, MethylationArray, Normalization, TwoChannel,
        CopyNumber
Packaged: 2014-09-11 03:44:34 UTC; biocbuild
Built: R 3.1.1; ; 2014-09-11 08:47:55 UTC; unix
