Package: supraHex
Type: Package
Title: A supra-hexagonal map for analysing tabular omics data
Version: 1.0.0
Date: 2013-09-19
Author: Hai Fang and Julian Gough
Maintainer: Hai Fang <hfang@cs.bris.ac.uk>
Depends: R (>= 3.0.1), hexbin
Imports: grid, MASS, Biobase
Description: A supra-hexagonal map is a giant hexagon on a 2-dimensional grid seamlessly consisting of smaller hexagons. It is supposed to train, analyse and visualise a high-dimensional omics data. The supraHex is able to carray out gene/meta-gene clustering and sample correlation, plus intuitive visualisations to facilitate exploratory analysis. Uniquely to this package, users can simultaneously understand their own omics data in a sample-specific fashion but without loss of information on large genes. 
URL: http://supfam.org/SUPERFAMILY/dcGO/supraHex.html
Collate: sHexGrid.r sTopology.r sInitial.r sTrainology.r sTrainSeq.r
        sTrainBatch.r sBMH.r sPipeline.r sNeighDirect.r sNeighAny.r
        sHexDist.r sDistance.r sDmat.r sDmatMinima.r sDmatCluster.r
        sCompReorder.r sWriteData.r visHexGrid.r visHexMapping.r
        visHexComp.r visColormap.r visColorbar.r visVp.r
        visHexMulComp.r visCompReorder.r visHexPattern.r
        visDmatCluster.r visKernels.r
License: GPL-2
biocViews: Bioinformatics, Clustering, Visualization, GeneExpression
Packaged: 2013-10-15 08:24:30 UTC; biocbuild
Built: R 3.0.2; ; 2013-10-15 16:12:44 UTC; windows
