Package: AllelicImbalance
Type: Package
Title: Investigates allele specific expression
Version: 1.0.0
Date: 2013-08-09
Author: Jesper R Gadin, Lasse Folkersen
Maintainer: Jesper R Gadin <j.r.gadin@gmail.com>
Description: Provides a framework for allelic specific expression investigation using RNA-seq data
License: GPL-3
Suggests: RUnit, org.Hs.eg.db,
        TxDb.Hsapiens.UCSC.hg19.knownGene,SNPlocs.Hsapiens.dbSNP.20120608
Depends: GenomicRanges, R (>= 3.0.0)
Imports: methods, BiocGenerics, Biostrings, IRanges, GenomicFeatures,
        Rsamtools, AnnotationDbi
biocViews: Genetics, Infrastructure, Allelic Imbalance, AI, ASE,
        HighThroughputSequencing
LazyData: TRUE
Collate: AllClasses.R AllGenerics.R initialize-methods.R
        ASEset-accessors.R auxillary-functions.R chisq.test-methods.R
        binom.test-methods.R barplot-methods.R locationplot-methods.R
Packaged: 2013-10-15 08:29:46 UTC; biocbuild
Built: R 3.0.2; ; 2013-10-15 14:41:54 UTC; windows
