Package: r3Cseq
Version: 1.6.0
Date: 10-25-2012
Title: Analysis of Chromosome Conformation Capture and Next-generation
        Sequencing (3C-seq)
Author: Supat Thongjuea, Bergen Center for Computational Science, Norway <supat.thongjuea@bccs.uib.no>
Maintainer: Supat Thongjuea <supat.thongjuea@bccs.uib.no>
Depends:
        GenomicRanges,Rsamtools,data.table,rtracklayer,VGAM,qvalue,RColorBrewer,sqldf,methods
Suggests:
        BSgenome.Mmusculus.UCSC.mm9,BSgenome.Hsapiens.UCSC.hg18,BSgenome.Hsapiens.UCSC.hg19
Description: This package is an implementation of data analysis for the long-range interactions from 3C-seq assay.
License: GPL-3
URL: http://r3cseq.genereg.net
biocViews: Preprocessing, Sequencing, HighThroughputSequencing
Collate: AllClasses.R AllGenerics.R Export.R FunctionInCommon.R
        FunctionsForBatchAnalysis.R RestrictionEnzymeFunctions.R
        FunctionsForNoReplicationAnalysis.R Report.R Visualize3Cseq.R
        Annotation.R
Packaged: 2013-04-04 10:58:40 UTC; biocbuild
Built: R 3.0.0; ; 2013-04-04 17:07:46 UTC; windows
