# R functions for the normalization of Exiqon miRNA array data

## Documentation for package ‘ExiMiR’ version 2.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

bg.correct.miR | ExiMiR low-level function for background correction
createAB | ExiMiR function for creating an AffyBatch object from other object types (RGList, EListRaw, MAList or list)
ExiMiR | R functions for the normalization of Exiqon miRNA array data
galenv | R annotation environment for GEO series GSE20122
GSE19183 | Affybatch object for the raw data from GEO series GSE19183
GSE20122 | Affybatch object for the raw data from GEO series GSE20122
make.gal.env | GAL Environment Maker
norm.miR | ExiMiR low-level function for miRNA raw data normalization.
NormiR | ExiMiR high-level function for miRNA raw data normalization.
NormiR.bgcorrect.methods | ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.normalize.methods | ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.pmcorrect.methods | ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.spikein.args | ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.summary.methods | ExiMiR functions for enumerating the names of low-level normalization methods or arguments
ReadExi | ExiMiR function for reading Exiqon raw data into an AffyBatch object.
summarize.miR | ExiMiR low-level function for summarization.