Data from 1000 Genomes, NA19240 (female) chr6 excerpt


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Documentation for package ‘ind1KG’ version 0.1.14

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c6snp SNP metadata used in calling for 1000 genomes pilot data
gw6c6.snp240 data frame with snp annotation regarding chr6, pertinent to the affy genomewide6 SNP chip
n240 NA19240 - 3 million reads from chromosome 6 derived from 1000 genomes bam file
oregdf data frame representing some of the OREGanno track of UCSC browser
pup240_500k data frame on a pileup for 500000 variants noted in NA19240
pup240_disc parsed samtools pileup result excerpt
rsgdf slice of information on transcripts, for ind1KG vignette
yri240_6 snp.matrix representation of called SNP on chr6 for NA19240