Package: rSFFreader
Type: Package
Title: rSFFreader reads in sff files generated by Roche 454 and Life
        Sciences Ion Torrent sequencers
Version: 0.6.0
Date: 2011-10-02
Author: Matt Settles <msettles@uidaho.edu>, Sam Hunter, Brice Sarver, Ilia Zhbannikov, Kyu-Chul Cho
Maintainer: Matt Settles <msettles@uidaho.edu>
Description: rSFFreader reads sequence, qualities and clip point values from sff files generated by Roche 454 and Life Sciences Ion Torrent sequencers. The plan is to also write out sff files and to read in flowgrams with some utils
License: Artistic-2.0
Depends: R (>= 2.13.0), Biostrings (>= 2.25.12), IRanges(>= 1.15.42),
        GenomicRanges, ShortRead(>= 1.15.9), xtable, methods
Imports: methods, Biostrings, IRanges, ShortRead, GenomicRanges,
        Biobase
LinkingTo: Biostrings, IRanges
biocViews: DataImport, Sequencing, HighThroughputSequencing
Collate: allClasses.R allGenerics.R methods-Misc.R methods-SffHeader.R
        methods-SffReads.R methods-SffReadsQ.R readSFF.R
Packaged: 2012-10-02 05:37:09 UTC; biocbuild
Built: R 2.15.1; universal-apple-darwin9.8.0; 2012-10-02 09:21:07 UTC; unix
Archs: i386, x86_64
