Package: PING
Type: Package
Title: Probabilistic inference for Nucleosome Positioning with
        MNase-based or Sonicated Short-read Data
Version: 1.0.0
Author: Xuekui Zhang <xuezhang@jhsph.edu>, Raphael Gottardo <raph@stat.ubc.ca>, Sangsoon Woo, <swoo@fhcrc.org>
Maintainer: Xuekui Zhang <xuezhang@jhsph.edu>, Raphael Gottardo
        <raph@stat.ubc.ca>, Sangsoon Woo, <swoo@fhcrc.org>
Depends: R(>= 2.11.0),chipseq
Imports: methods, graphics, grDevices, stats, GenomeGraphs, fda ,
        IRanges, GenomicRanges, BSgenome, stats4, BiocGenerics
Suggests: snowfall, ShortRead, rtracklayer
Enhances: parallel
Description: Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach. 
biocViews: Clustering, Statistics, Visualization, Sequencing
Collate: setClasses.R setMethods.R makeRangedDataOutput.R PING.R
        PlotRegions.R postPING.R segmentReads.R setParaEM.R
        setParaPrior.R setParaSeg.R utility.R
License: Artistic-2.0
Packaged: 2012-03-31 09:18:50 UTC; biocbuild
Built: R 2.15.0; i386-pc-mingw32; 2012-03-31 12:47:10 UTC; windows
Archs: i386, x64
