Package: KEGGgraph
Type: Package
Title: KEGGgraph: A graph approach to KEGG PATHWAY in R and
        Bioconductor
Version: 1.12.0
Date: 2011-12-14
Author: Jitao David Zhang
Maintainer: Jitao David Zhang <jitao_david.zhang@roche.com>
Description: KEGGGraph is an interface between KEGG pathway and graph object as well as a collection of tools to analyze, dissect and visualize these graphs. It parses the regularly updated KGML (KEGG XML) files into graph models maintaining all essential pathway attributes. The package offers functionalities including parsing, graph operation, visualization and etc.
License: GPL (>= 2)
LazyLoad: yes
Depends: R (>= 2.10), methods, XML (>= 2.3-0), graph
Imports: methods, XML, graph
Suggests: Rgraphviz, RBGL, RUnit, RColorBrewer, KEGG.db, org.Hs.eg.db,
        hgu133plus2.db, SPIA
Collate: kegg2graph-functions.R parse.R annotation.R graph.R kgmlfile.R
        misc.R vis.R
URL: http://www.nextbiomotif.com
biocViews: Pathways, GraphsAndNetworks
Packaged: 2012-03-31 08:32:46 UTC; biocbuild
Built: R 2.15.0; ; 2012-03-31 12:41:03 UTC; windows
