Illumina Sentrix MouseRef-8 or Mouse-6 version 1 or 1.1 Annotation Data (lumiMouseV1)


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Documentation for package ‘lumiMouseV1’ version 1.3.1

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lumiMouseV1 Bioconductor annotation data package
lumiMouseV1ACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
lumiMouseV1CHR Map Manufacturer IDs to Chromosomes
lumiMouseV1CHRLENGTHS A named vector for the length of each of the chromosomes
lumiMouseV1CHRLOC Map Manufacturer IDs to Chromosomal Location
lumiMouseV1ENTREZID Map between Manufacturer Identifiers and Entrez Gene
lumiMouseV1ENZYME Map Between Manufacturer IDs and Enzyme Commission (EC) Numbers
lumiMouseV1ENZYME2PROBE Map Between Enzyme Commission Numbers and Manufacturer Identifiers
lumiMouseV1GENENAME Map Between Manufacturer IDs and Genes
lumiMouseV1GO Map between Manufacturer IDs and Gene Ontology (GO)
lumiMouseV1GO2ALLPROBES Map Between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
lumiMouseV1GO2PROBE Map Between Gene Ontology (GO) and Manufacturer Identifiers
lumiMouseV1LOCUSID Map between Manufacturer Identifiers and Entrez Gene
lumiMouseV1MAP Map between Manufacturer Identifiers and cytogenetic maps/bands
lumiMouseV1MAPCOUNTS Quality control information for lumiMouseV1
lumiMouseV1ORGANISM The Organism for lumiMouseV1
lumiMouseV1PATH Mappings between probe identifiers and KEGG pathway identifiers
lumiMouseV1PATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
lumiMouseV1PFAM Map Manufacturer IDs to Pfam IDs
lumiMouseV1PMID Map between Manufacturer Identifiers and PubMed Identifiers
lumiMouseV1PMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
lumiMouseV1PROBEID2NUID Map between Illumina ProbeID and nuID
lumiMouseV1PROSITE Map Manufacturer IDs to PROSITE ID
lumiMouseV1QC Quality control information for lumiMouseV1
lumiMouseV1QCDATA Quality control information for lumiMouseV1
lumiMouseV1REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
lumiMouseV1SUMFUNC Map between Manufacturer Identifiers and Gene Function Summaries
lumiMouseV1SYMBOL Map between Manufacturer Identifiers and Gene Symbols
lumiMouseV1TARGETID2NUID Map between Illumina TargetID and nuID
lumiMouseV1UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers