hgu95eOMIM {hgu95e} | R Documentation |
hgu95eOMIM is an R environment that provides mappings between manufacturer identifiers and OMIM identifiers.
Each manufacturer identifier is mapped to a vector of OMIM identifiers. The vector
length may be one or longer, depending on how many OMIM identifiers the
manufacturer identifier maps to. An NA
is reported for any manufacturer
identifier that cannot be mapped to an OMIM identifier at this time.
OMIM is based upon the book Mendelian Inheritance in Man (V. A. McKusick) and focuses primarily on inherited or heritable genetic diseases. It contains textual information, pictures, and reference information that can be searched using various terms, among which the MIM number is one.
Mappings were based on data provided by:
Entrez Gene:ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/. Built: Source data downloaded from Entrez Gene on Fri Aug 24 22:30:30 2007
Package built Fri Aug 24 22:52:31 2007
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene http://www3.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM
# Convert the environment to a list xx <- as.list(hgu95eOMIM) # Remove probe identifiers that do not map to any MIM number xx <- xx[!is.na(xx)] if(length(xx) > 0){ # The MIM numbers for the first two elements of XX xx[1:2] # Get the first one xx[[1]] }