A data package containing annotation data for YEAST


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Documentation for package ‘YEAST’ version 2.0.1

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YEAST Bioconductor annotation data package
YEASTALIAS Map Open Reading Frame (ORF) Identifiers to Alias Gene Names
YEASTCHR Map Manufacturer IDs to Chromosomes
YEASTCHRLENGTHS A named vector for the length of each of the chromosomes
YEASTCHRLOC Map Manufacturer IDs to Chromosomal Location
YEASTCOMMON2SYSTEMATIC Map Between Yeast Common Names and Systematic Names
YEASTDESCRIPTION An annotation data file that maps Open Reading Frame (ORF) identifiers to textural descriptions of the corresponding genes
YEASTENZYME Map Between Manufacturer IDs and Enzyme Commission (EC) Numbers
YEASTENZYME2PROBE Map Between Enzyme Commission Numbers and Manufacturer Identifiers
YEASTGENENAME Map Between Manufacturer IDs and Genes
YEASTGO Map between Manufacturer IDs and Gene Ontology (GO)
YEASTGO2ALLPROBES Map Between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
YEASTGO2PROBE Map Between Gene Ontology (GO) and Manufacturer Identifiers
YEASTINTERPRO Map Yeast Systematic Names to InterPro IDs
YEASTMAPCOUNTS Quality control information for YEAST
YEASTORGANISM The Organism for YEAST
YEASTPATH Mappings between probe identifiers and KEGG pathway identifiers
YEASTPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
YEASTPFAM Map Yeast Systematic Names to Pfam IDs
YEASTPMID Map between Manufacturer Identifiers and PubMed Identifiers
YEASTPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
YEASTQC Quality control information for YEAST
YEASTQCDATA Quality control information for YEAST
YEASTREJECTORF Real and Rejected Yeast Genes (ORF)
YEASTSMART Map Yeast Systematic Names to SMART IDs