pfamMEROPS2AC {PFAM}R Documentation

Mappings from MEROPS ID to Accession number

Description

Mapping function from MEROPS ID (MEROPS) to the associated Accession number (AC)

Usage

pfamMEROPS2AC(merops=NULL)

Arguments

merops A character vector of MEROPS ID or NULL (default)

Details

If merops is a vector of MEROPS ID, pfamMEROPS2AC will return a list of associated Accession number for the given merops. If merops is NULL, pfamMEROPS2AC(merops=NULL) (or pfamMEROPS2AC()) will return a list of associated Accession number for all the MEROPS ID in the database. Extra information: None More Details: The MEROPS database (http://merops.sanger.ac.uk/) is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhibit them. Reference: Rawlings, N.D., Tolle, D.P. & Barrett, A.J. (2004) MEROPS: the peptidase database. Nucleic Acids Res. 32 Database issue, D160-D164

Value

A list of Accession number.

Author(s)

Ting-Yuan Liu

References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

Examples

## Not run: 
    MEROPS2AC <- pfamMEROPS2AC()
    head(MEROPS2AC)
    pfamMEROPS2AC(merops=sample(names(MEROPS2AC), 3))
## End(Not run)

[Package PFAM version 2.0.0 Index]