pfamURL2AC {PFAM}R Documentation

Mappings from URL ID to Accession number

Description

Mapping function from URL ID (URL) to the associated Accession number (AC)

Usage

pfamURL2AC(url=NULL)

Arguments

url A character vector of URL ID or NULL (default)

Details

If url is a vector of URL ID, pfamURL2AC will return a list of associated Accession number for the given url. If url is NULL, pfamURL2AC(url=NULL) (or pfamURL2AC()) will return a list of associated Accession number for all the URL ID in the database. Extra information: None More Details: None

Value

A list of Accession number.

Author(s)

Ting-Yuan Liu

References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

Examples

## Not run: 
    URL2AC <- pfamURL2AC()
    head(URL2AC)
    pfamURL2AC(url=sample(names(URL2AC), 3))
## End(Not run)

[Package PFAM version 2.0.0 Index]