### Name: extract.lib
### Title: Functions for SAGE library extraction
### Aliases: extract.lib.from.zip extract.lib.from.directory
###   extract.library.tags compute.unique.tags combine.libs
###   remove.sage.artifacts read.phd.file read.seq.qual.filepair
###   extract.ditags reestimate.lib.from.tagcounts SAGEartifacts
### Keywords: manip

### ** Examples

#library(sagenhaft)
#file.copy(system.file("data/E15postHFI.zip",package="sagenhaft"),
#          "E15postHFI.zip")
#E15post<-extract.lib.from.zip("E15postHFI.zip", taglength=10,
#                              min.ditag.length=20, max.ditag.length=24)
#E15post



