Biobase-package {Biobase} | R Documentation

## Biobase Package Overview

### Description

Biobase Package Overview

### Details

Important data classes: `ExpressionSet`, `AnnotatedDataFrame` `MIAME`. Full help on methods and associated functions is available from within class help pages.

Additional data classes: `eSet`, `MultiSet`. Additional manipulation and data structuring classes: `Versioned`, `VersionedBiobase`, `aggregator`, `container`.

Vignette routines: `openVignette`, `getPkgVigs`, `openPDF`.

Package manipulation functions: `createPackage` and `package.version`

Data sets: `aaMap`, `sample.ExpressionSet`, `sample.exprSet`, `geneData`.

Introductory information is available from vignettes, type `openVignette()`.

Full listing of documented articles is available in HTML view by typing `help.start()` and selecting `Biobase` package from the `Packages` menu or via `library(help="Biobase")`.

Signficant deprecated classes: `exprSet`, `phenoData`.

### Author(s)

O. Sklyar

[Package Biobase version 1.16.3 Index]