Entry: Cagney2001BPGraph
Aliases: Cagney2001BPGraph
Keywords: datasets
Description: A directed Graph for the Y2H Bait to Prey Interaction data detected by Cagney et al. 2001.
URL: ../../../library/ppiData/html/Cagney2001BPGraph.html

Entry: Gavin2002BPGraph
Aliases: Gavin2002BPGraph
Keywords: datasets
Description: A directed Graph for the AP-MS Bait to Prey Interaction data detected by Gavin et al. 2002.
URL: ../../../library/ppiData/html/Gavin2002BPGraph.html

Entry: Gavin2006BPGraph
Aliases: Gavin2006BPGraph
Keywords: datasets
Description: A directed Graph for the AP-MS Bait to Prey Interaction data detected by Gavin et al. 2006.
URL: ../../../library/ppiData/html/Gavin2006bPGraph.html

Entry: Hazbun2003BPGraph
Aliases: Hazbun2003BPGraph
Keywords: datasets
Description: A directed Graph for the Y2H Bait to Prey Interaction data detected by Hazbun et al. 2003.
URL: ../../../library/ppiData/html/Hazbun2003BPGraph.html

Entry: Ho2002BPGraph
Aliases: Ho2002BPGraph
Keywords: datasets
Description: A directed Graph for the AP-MS Bait to Prey Interaction data detected by Ho et al. 2002.
URL: ../../../library/ppiData/html/Ho2002BPGraph.html

Entry: Ito2001BPGraph
Aliases: Ito2001BPGraph
Keywords: datasets
Description: A directed Graph for the Y2H Bait to Prey Interaction data detected by Ito et al. 2001.
URL: ../../../library/ppiData/html/Ito2001BPGraph.html

Entry: Krogan2004BPGraph
Aliases: Krogan2004BPGraph
Keywords: datasets
Description: A directed Graph for the AP-MS Bait to Prey Interaction data detected by Krogan et al. 2004.
URL: ../../../library/ppiData/html/Krogan2004BPGraph.html

Entry: Krogan2006BPGraph
Aliases: Krogan2006BPGraph
Keywords: datasets
Description: A directed Graph for the AP-MS Bait to Prey Interaction data detected by Krogan et al. 2006.
URL: ../../../library/ppiData/html/Krogan2006BPGraph.html

Entry: Tong2002BPGraph
Aliases: Tong2002BPGraph
Keywords: datasets
Description: A directed Graph for the Y2H Bait to Prey Interaction data detected by Tong et al. 2002.
URL: ../../../library/ppiData/html/Tong2002BPGraph.html

Entry: Uetz2000BPGraph1
Aliases: Uetz2000BPGraph1
Keywords: datasets
Description: A directed Graph for the Y2H Bait to Prey Interaction data detected by Uetz et al. 2000.
URL: ../../../library/ppiData/html/Uetz2000BPGraph1.html

Entry: Uetz2000BPGraph2
Aliases: Uetz2000BPGraph2
Keywords: datasets
Description: A directed Graph for the Y2H Bait to Prey Interaction data detected by Uetz et al. 2000.
URL: ../../../library/ppiData/html/Uetz2000BPGraph2.html

Entry: Zhao2005BPGraph
Aliases: Zhao2005BPGraph
Keywords: datasets
Description: A directed Graph for the Y2H Bait to Prey Interaction data detected by Zhao et al. 2005.
URL: ../../../library/ppiData/html/Zhao2005BPGraph.html

Entry: bpExperimentNames
Aliases: bpExperimentNames
Keywords: datasets
Description: A Character Vector Containing the Names of the 12 Graph Objects Stored in this Data Package
URL: ../../../library/ppiData/html/bpExperimentNames.html

Entry: collectIntactPPIData
Aliases: collectIntactPPIData
Keywords: datagen
Description: A function that parses the Intact repository for bait to prey affiliation
URL: ../../../library/ppiData/html/collectIntactPPIData.html

Entry: createBPList
Aliases: createBPList
Keywords: datagen
Description: A function to create the Bait to Prey association list.
URL: ../../../library/ppiData/html/createBPList.html

Entry: intAct2Sys
Aliases: intAct2Sys
Keywords: datagen
Description: A function that maps the Intact ID's to the first YEAST systematic name using the YEAST package
URL: ../../../library/ppiData/html/intAct2Sys.html

Entry: intActPPIData
Aliases: intActPPIData
Keywords: datasets
Description: A data set documenting the output of collectIntactPPIData
URL: ../../../library/ppiData/html/intActPPIData.html

Entry: map2Systematic
Aliases: map2Systematic
Keywords: datagen
Description: A function that maps the Intact ID's to Yeast Systematic Names if possible
URL: ../../../library/ppiData/html/map2Systematic.html

Entry: map2Systematic2
Aliases: map2Systematic2
Keywords: datagen
Description: A secondary function that maps the Intact ID's to Yeast Systematic Names if possible
URL: ../../../library/ppiData/html/map2Systematic2.html

Entry: ppipred
Aliases: ppipred
Keywords: datasets
Description: Protein-protein predictions
URL: ../../../library/ppiData/html/ppipred.html

Entry: proteinProperty
Aliases: proteinProperty
Keywords: datasets
Description: A data frame which details 33 properties of the Yeast Genome
URL: ../../../library/ppiData/html/proteinProperty.html

Entry: sWAC2Sys
Aliases: sWAC2Sys
Keywords: datasets
Description: A data set that contains the translation between Swiss accension codes to Gene Systematic Names
URL: ../../../library/ppiData/html/sWAC2Sys.html

Entry: stochasticBaits
Aliases: stochasticBaits
Keywords: datasets
Description: Lists of viable baits in each bait to prey dataset which are conjectured not to be systematically biased.
URL: ../../../library/ppiData/html/stochasticBaits.html

Entry: tableList
Aliases: tableList
Keywords: datasets
Description: A list of tables for the downloaded and parsed xml files from the IntAct database
URL: ../../../library/ppiData/html/tableList.html

Entry: viablePrey
Aliases: viablePrey viableBaits
Keywords: datasets
Description: Lists of viable prey or baits in each bait to prey dataset
URL: ../../../library/ppiData/html/viableProteins.html

Entry: y2h
Aliases: y2h
Keywords: datasets
Description: A data set documenting the bait to prey associations for the y2h empirical data-sets as found within the IntAct repository.
URL: ../../../library/ppiData/html/y2h.html

Entry: y2hSysGW
Aliases: y2hSysGW
Keywords: datasets
Description: A data object documenting the bait to prey associations for the y2h empirical data-sets with two restrictions.
URL: ../../../library/ppiData/html/y2hSysGW.html
