stochasticBaits           package:ppiData           R Documentation

_L_i_s_t_s _o_f _v_i_a_b_l_e _b_a_i_t_s _i_n _e_a_c_h _b_a_i_t _t_o _p_r_e_y _d_a_t_a_s_e_t _w_h_i_c_h
_a_r_e _c_o_n_j_e_c_t_u_r_e_d _n_o_t _t_o _b_e _s_y_s_t_e_m_a_t_i_c_a_l_l_y _b_i_a_s_e_d.

_D_e_s_c_r_i_p_t_i_o_n:

     These are named lists consisting of viable  baits corresponding to
     each dataset which are not believed to suffer from systematic bias
     due to the bait to prey systems. 

     The names should be listed by the systematic gene names. If  the
     systematic gene names could not be found, then a common  name is
     used. If the data was obtained from IntAct, and neither a common
     nor a systematic name could be found, the IntAct  Accension
     Identification Code ("EBI-*****") is retained. The  IntAct Codes
     will always be listed first if they exist.

     Because we have chosen to supress the homodimer relationships
     within the respective bait to prey directed graphs, there will be
     proteins listed as viable prey which index isolated  nodes in the
     graphs. These isolated nodes simply mean that  these proteins were
     only seen to interact within homodimer relationships.

_U_s_a_g_e:

     data(stocasticBaits)

_F_o_r_m_a_t:

     A named list. Each element is a character vector of the viable
     baits for the corresponding dataset.

_E_x_a_m_p_l_e_s:

     data(stochasticBaits)
     stochasticBaits[[1]][1:5]

