detectionCall {lumi} | R Documentation

## Estimate the detectable probe ratio in each sample

### Description

### Usage

    detectionCall(x.lumi, Th = 0.01)

### Arguments

`x.lumi` | a LumiBatch object
`Th` | the threshold. By default, when the detection p-value is less than 0.01, we suppose it is detectable. For the old version of BeadStudio output (version 2 or earlier), the threshold will automatically transferred as 1 - Th, because in the old format, value close to 1 is suppose to be detectable.

### Value

Return the detectable probe ratio of each sample

### Author(s)

Pan Du

### References

### See Also

`lumiQ`

### Examples

    ## load example data
    data(example.lumi)
    ## load example data
    data(example.lumi)

    ## estimate the detect call (percentage of expressed genes)
    temp <- detectionCall(example.lumi)
    print(temp)

[Package lumi version 1.2.0 Index]