make.swap {genArise} | R Documentation

## Swap analysis

### Description

Read both files, but only extract the interested columns and create a Spot object.

### Usage

    make.swap(spot1, spot2, Cy3, Cy5, BgCy3, BgCy5, Id, Symdesc, header = FALSE, is.ifc = FALSE,envir,nr,nc)

### Arguments

`spot1` | a connection or a character string giving the name of the file to read where each column represent the spot components.
`spot2` | a connection or a character string giving the name of the file to read where each column represent the spot components.
`Cy3` | column that represent Cy3.
`Cy5` | column that represent Cy5.
`BgCy3` | column that represent BgCy3.
`BgCy5` | column that represent BgCy5.
`Id` | column that represent Id.
`Symdesc` | optional identifier besides the Id column.
`header` | the logical value of the header input file
`is.ifc` | If is.ifc = TRUE this experiment was done in the Unit of Microarray from Cellular Phisiology Institute.
`envir` | Environment where are the genArise variables.
`nr` | Total of meta-row.
`nc` | Total of meta-column.

### See Also

`write.spot`.

[Package genArise version 1.12.0 Index]