\HeaderA{rmaref.predict}{A function used by the rmaplus function}{rmaref.predict}
\keyword{manip}{rmaref.predict}
\begin{Description}\relax
Derive RMA+ expression. Used by \code{rmaplus}. The function does not 
background correct and normalize the probe-level data.
\end{Description}
\begin{Usage}
\begin{verbatim}
rmaref.predict(Future, p.e)
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{Future}] An \code{affybatch} object of the microarrays to be summarized 
by the RMA+ method.
\item[\code{p.e}] The pre-stored list of the probe.effects.It is a probe.coefs object 
of PLMset class in \code{affyPLM} package.
\end{ldescription}
\end{Arguments}
\begin{Value}
The RMA+ intensities of \code{Future}.
\end{Value}
\begin{Note}\relax
Use the \code{rmaplus} function to normalize \code{Future} to pre-stored 
reference quantiles and correct the probe effects to obtain the RMA+ 
intensities.
\end{Note}
\begin{Author}\relax
Kai-Ming Chang(Kai-Ming.Chang@astrazeneca.com, kaiming@gmail.com)
\end{Author}
\begin{References}\relax
Chang,K.M., Harbron,C., South,M.C. (2006) An Exploration of 
Extensions to the RMA Algorithm. (Submitted)
\end{References}
\begin{SeeAlso}\relax
\code{\LinkA{PLMset-class}{PLMset.Rdash.class}},\code{\LinkA{rma.para}{rma.para}},
\code{\LinkA{rmaplus}{rmaplus}}
\end{SeeAlso}
\begin{Examples}
\begin{ExampleCode}
\end{ExampleCode}
\end{Examples}

