pathways            package:GlobalAncova            R Documentation

_C_a_n_c_e_r _r_e_l_a_t_e_d _p_a_t_h_w_a_y_s

_D_e_s_c_r_i_p_t_i_o_n:

     A list of nine cancer related pathways corresponding to the van
     t'Veer data. Each element contains a vector gene names
     corresponding to those in the data set.

_U_s_a_g_e:

     data(pathways)

_F_o_r_m_a_t:

     The format is:  
      'List of 9'       
      '$ androgen_receptor_signaling: chr [1:72] "AW025529" "NM_001648"
     "NM_001753" "NM_003298" ...'
      '$ apoptosis                  : chr [1:187] "AB033060"
     "NM_002341" "NM_002342" "AI769763" ...'   
      '$ cell_cycle_control         : chr [1:31] "NM_001759"
     "NM_001760" "NM_001786" "NM_001789" ...' 
      '$ notch_delta_signalling     : chr [1:34] "NM_002405" "AL133036"
     "NM_003260" "NM_004316" ...' 
      '$ p53_signalling             : chr [1:33] "NM_002307"
     "NM_002392" "NM_003352" "NM_002745" ...'
      '$ ras_signalling             : chr [1:266] "D25274" "AI033397"
     "NM_003029" "NM_001626" ...'
      '$ tgf_beta_signaling         : chr [1:82] "NM_003036" "AI090812"
     "AI697699" "AI760298" ...'   
      '$ tight_junction_signaling   : chr [1:326] "D25274" "AA604213"
     "AF018081" "NM_003005" ...'  
      '$ wnt_signaling              : chr [1:176] "AB033058" "AB033087"
     "NM_003012" "NM_003014" ...'

_E_x_a_m_p_l_e_s:

     data(pathways)
     #str(pathways)

