extract {BeadExplorer} | R Documentation

## Extract columns from a BeadStudio file

### Description

Extract columns from a BeadStudio 'gene profile.csv' file

### Usage

    extract(filenames = NULL, match = "AVG_Signal", verbose = TRUE)

### Arguments

`filenames` | A character file path of a 'gene profile.csv' file
`match` | A term to identify the columns to extract
`verbose` | Logical, should a commentary be provided

### Details

This function extracts certain columns from the BeadStudio 'gene profile.csv' output file that contain the 'match' arguments in the column header.

### Value

A `data.frame` of extracted columns

### Author(s)

Gareth Elvidge gareth.elvidge@well.ox.ac.uk

### Examples

    ## Not run:
    ##Extract columns representing detection calls
    #extract(match="Detection")

    ##Extract columns representing number of beads used to analyse each transcript
    #extract(match="Avg_NBEADS")
    ## End(Not run)

[Package BeadExplorer version 1.2.0 Index]