getRefflat {ACME} | R Documentation

## Get the refflat table from ucsc for the given genome

### Description

Fetches the refflat table from ucsc, stores in temp dir and then gunzips it and reads it in.

### Usage

    getRefflat(genome = "hg17")

### Arguments

`genome` | The genome code from ucsc, like 'hg16', 'mm6', etc.

### Value

A data frame mirroring the UCSC table structure.

### Author(s)

Sean Davis <sdavis2@mail.nih.gov>

### References

http://genome.ucsc.edu

### See Also

`findClosestGene`

### Examples

    rf <- getRefflat('hg17')

[Package ACME version 1.2.1 Index]