"plot-methods"           package:rflowcyt           R Documentation

_G_r_a_p_h_i_c_a_l _r_e_p_r_e_s_e_n_t_a_t_i_o_n _o_f _a_n _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     The default action is a graphical plot of the object.

_M_e_t_h_o_d_s:


     _x = "_A_N_Y", _y = "_A_N_Y" A scatterplot or other graphical
          representation is produced.

     _x = "_F_C_S", _y = "_m_i_s_s_i_n_g" The default action is contour-image pairs
          plotting for all the column variables.

     _x = "_F_C_S", _y = "_m_i_s_s_i_n_g", _i_m_a_g_e._p_a_r_a_l_l_e_l._p_l_o_t=_F_A_L_S_E, _j_o_i_n_t=_T_R_U_E, ... An
          optional image parallel coordinates plotting (either marginal
          or joint) for each row/cell across all column variables can
          also be displayed.

          The optional signature details are listed below:

     _i_m_a_g_e._p_a_r_a_l_l_e_l._p_l_o_t boolean; if true the image parallel
          coordinates plot will be implemented instead of default pairs
          plot; default value of FALSE

     _j_o_i_n_t boolean; if image.parallel.plot is TRUE, then this boolean
          establishes if the image parallel coordinates plot is joint
          or not

     ... optional additional plot variables; See 'ImageParCoord' or
          'pairs.CSP' for additional information on image parallel
          coordinates plotting and pairs contour-image plotting,
          respectively. 

     _x="_P_R_I_M._s_t_e_p", _y="_m_i_s_s_i_n_g" Trajectory plot using the
          'trajectory.pl' function in the 'rfcprim' pacakge is
          displayed for the step.


     _x="_P_R_I_M._s_t_e_p._s_e_t", _y="_m_i_s_s_i_n_g" Trajectory plot using the
          'trajectory.pl' function in the 'rfcprim' is displayed for
          the peeling and the expansion steps.

     _x="_P_R_I_M._c_r_o_s_s_v_a_l._s_t_e_p", _y="_m_i_s_s_i_n_g" Trajectory plot using the
          'trajectory.pl' function in the 'rfcprim' is displayed for
          the peeling and the expansion steps for each testdata set.

     _x="_P_R_I_M._r_u_l_e", _y="_m_i_s_s_i_n_g" Trajectory plots for all 3 steps is
          displayed. 


