\HeaderA{Massvector-class}{Class "Massvector"}{Massvector.Rdash.class}
\aliasA{coerce,Massvector,data.frame-method}{Massvector-class}{coerce,Massvector,data.frame.Rdash.method}
\aliasA{coerce,Massvector,list-method}{Massvector-class}{coerce,Massvector,list.Rdash.method}
\aliasA{coerce,Massvector,numeric-method}{Massvector-class}{coerce,Massvector,numeric.Rdash.method}
\aliasA{hist,Massvector-method}{Massvector-class}{hist,Massvector.Rdash.method}
\aliasA{image,Massvector-method}{Massvector-class}{image,Massvector.Rdash.method}
\aliasA{initialize,Massvector-method}{Massvector-class}{initialize,Massvector.Rdash.method}
\aliasA{length,Massvector-method}{Massvector-class}{length,Massvector.Rdash.method}
\aliasA{mvscale,Massvector-method}{Massvector-class}{mvscale,Massvector.Rdash.method}
\aliasA{pairplot,Massvector,Massvector-method}{Massvector-class}{pairplot,Massvector,Massvector.Rdash.method}
\aliasA{pep.plot,Massvector,missing-method}{Massvector-class}{pep.plot,Massvector,missing.Rdash.method}
\aliasA{plot,Massvector,Massvector-method}{Massvector-class}{plot,Massvector,Massvector.Rdash.method}
\aliasA{plot,Massvector,missing-method}{Massvector-class}{plot,Massvector,missing.Rdash.method}
\aliasA{points,Massvector-method}{Massvector-class}{points,Massvector.Rdash.method}
\aliasA{readBruker,Massvector-method}{Massvector-class}{readBruker,Massvector.Rdash.method}
\aliasA{readMV,Massvector,character-method}{Massvector-class}{readMV,Massvector,character.Rdash.method}
\aliasA{show,Massvector-method}{Massvector-class}{show,Massvector.Rdash.method}
\aliasA{summary,Massvector-method}{Massvector-class}{summary,Massvector.Rdash.method}
\aliasA{writeMV,Massvector,character-method}{Massvector-class}{writeMV,Massvector,character.Rdash.method}
\aliasA{[,Massvector-method}{Massvector-class}{[,Massvector.Rdash.method}
\keyword{classes}{Massvector-class}
\begin{Description}\relax
A concise (1-5 lines) description of what the class is.
\end{Description}
\begin{Section}{Objects from the Class}
Objects can be created by calls of the form \code{new("Massvector", data, info, tcoor, gelcoor, access, pionm)}.
\end{Section}
\begin{Section}{Slots}
\describe{
\item[\code{.Data}:] Object of class \code{"matrix"}. First column
contains masses. Second can contain intesnities.
\item[\code{info}:] Object of class \code{"character"}, information field
\item[\code{tcoor}:] Object of class \code{"numeric"}, target coordinates
\item[\code{gelcoor}:] Object of class \code{"numeric"}, gel coordinates
\item[\code{access}:] Object of class \code{"character"}, accession string
\item[\code{pionm}:] Object of class \code{"numeric"}, parent ion
mass
\item[\code{zvalue}:] Object of class \code{"numeric"}, Charge of
the parent ion
}
\end{Section}
\begin{Section}{Extends}
Class \code{"matrix"}, directly.
\end{Section}
\begin{Section}{Methods}
\describe{
\item[[] \code{signature(x = "Massvector")}: ... 
\item[coerce] \code{signature(from = "Massvector", to = "array")}: ... 
\item[coerce] \code{signature(from = "Massvector", to = "list")}: ... 
\item[coerce] \code{signature(from = "Massvector", to = "data.frame")}: ... 
\item[image] \code{signature(x = "Massvector")}: ... 
\item[initialize] \code{signature(.Object = "Massvector")}: ... 
\item[length] \code{signature(x = "Massvector")}: ... 
\item[mvmeannorm] \code{signature(object = "Massvector")}: ... 
\item[mvscale] \code{signature(object = "Massvector")}: see \code{\LinkA{scale}{scale}} 
\item[plot] \code{signature(x = "Massvector", y = "Massvector")}: ... 
\item[pairplot] \code{signature(x = "Massvector", y ="Massvector")}:  Head-To-Tail Plot
\item[plot] \code{signature(x = "Massvector", y = "missing")}: ... 
\item[points] \code{signature(x = "Massvector")}: add stick spectrum to plot
\item[readBruker] \code{signature(object = "Massvector")}: reads
Bruker XML file 
\item[readMV] \code{signature(object = "Massvector", src =
        "character")}: reads Massvector from file 
\item[show] \code{signature(object = "Massvector")}:  
\item[summary] \code{signature(object = "Massvector")}:  
\item[writeMV] \code{signature(object = "Massvector", path =
        "character")}: writes Massvector to file
\item[pep.plot] \code{signature(x = "Massvector", y =
        "missing")}: \code{\LinkA{pep.plot}{pep.plot}}
}
\end{Section}
\begin{Note}\relax
\end{Note}
\begin{Author}\relax
Witold E. Wolski \email{witek96@users.sourceforge.net}
\end{Author}
\begin{SeeAlso}\relax
\code{\LinkA{fdist-methods}{fdist.Rdash.methods},\LinkA{fdist-methods}{fdist.Rdash.methods},\LinkA{fdist-methods}{fdist.Rdash.methods}},
,\code{\LinkA{Massvectorlist-class}{Massvectorlist.Rdash.class}},\code{\LinkA{fintersect-methods}{fintersect.Rdash.methods}},\code{\LinkA{gamasses-methods}{gamasses.Rdash.methods}}
,\code{\LinkA{finterS-methods}{finterS.Rdash.methods}},\code{\LinkA{funion-methods}{funion.Rdash.methods}},\code{\LinkA{nrmatch-methods}{nrmatch.Rdash.methods}}
\end{SeeAlso}
\begin{Examples}
\begin{ExampleCode}
data(pldata)
new("Massvector")
new("Massvector",matrix(1:20,ncol=2),info="dummy",tcoor=c(0,0),gelcoor=c(0,0))
pl1<-pldata[[1]]
pl2<-pldata[[2]]
pl1
plot(pl1)
image(pl1)
length(pl1)
\end{ExampleCode}
\end{Examples}

