slideQuality          package:arrayQuality          R Documentation

_Q_u_a_l_i_t_y _C_o_n_t_r_o_l _s_t_a_t_i_s_t_i_c_s _f_o_r _g_e_n_e_r_a_l _h_y_b_r_i_d_i_z_a_t_i_o_n

_D_e_s_c_r_i_p_t_i_o_n:

     This component uses data extracted from GenePix file to provide
     quality control statistics.

_U_s_a_g_e:

     slideQuality(gprData = NULL, controlMatrix = controlCode, controlId = c("ID", "Name"), DEBUG = FALSE,...)

_A_r_g_u_m_e_n_t_s:

 gprData: A list of vector, results from 'readGPR', containing
          information extracted from the gpr file.

controlMatrix: A matrix defining control status information.

controlId: Character string. Name of the column of the gpr file used to
          define controls.

   DEBUG: If 'TRUE', debug statements are printed.

     ...: additional arguments

_V_a_l_u_e:

     A matrix of numbers.

_A_u_t_h_o_r(_s):

     Agnes Paquet

_S_e_e _A_l_s_o:

     'gpQuality', 'globalQuality', 'readGPR'

_E_x_a_m_p_l_e_s:

     datadir <- system.file("gprQCData", package="arrayQuality")
     if (interactive())
     {
     gprdata <- readGPR(fnames="9Mm137.gpr", path=datadir)
     results <- slideQuality(gprdata)
     }

