qualityScore          package:arrayQuality          R Documentation

_Q_u_a_l_i_t_y _C_o_n_t_r_o_l _s_c_o_r_e _f_o_r _g_e_n_e_r_a_l _h_y_b_r_i_d_i_z_a_t_i_o_n

_D_e_s_c_r_i_p_t_i_o_n:

     This function returns, for each quality measure, the percentage of
     reference slides measures which are below the tested slide values.
     For more details on this score, refer to the online manual.

_U_s_a_g_e:

     qualityScore(slidequality, organism = c("Mm", "Hs"), reference =
     NULL)

_A_r_g_u_m_e_n_t_s:

slidequality: A quality matrix from slideQuality.

reference: A matrix resulting from globalQuality, to be used as
          reference table to compare slides. If 'NULL', the default
          table corresponding to organism will be used. See details for
          more information.

organism: A "character" string naming the organism genome printed on
          the array, either "Mm" or "Hs". By default, organism is set
          to "Mm". It is used to retrieve the corresponding reference
          tables.

_V_a_l_u_e:

     A matrix of percentages.

_A_u_t_h_o_r(_s):

     Agnes Paquet

