readGPR             package:arrayQuality             R Documentation

_R_e_a_d_i_n_g _G_e_n_e_P_i_x _g_p_r _f_i_l_e

_D_e_s_c_r_i_p_t_i_o_n:

     This component reads a GenePix file (.gpr) and returns columns
     used for quality control.

_U_s_a_g_e:

     readGPR(fnames = NULL, path= ".", DEBUG=FALSE, skip = 0, sep ="\t",
     quote="\"", ...)

_A_r_g_u_m_e_n_t_s:

  fnames: A "character" string naming the input file.

    path: a "character" string representing the data directory.  By
          default this is set to the current working directory (".").

   DEBUG: If 'TRUE', debug statements are printed.

    skip: Number of lines to skip in the gpr files.

     sep: A "character" string defining the type of separation for the
          columns in the gpr files.

   quote: A "character" string defining the type of quote in the gpr
          files.

     ...: additional arguments.

_V_a_l_u_e:

     A list of vectors containing information extracted from the
     GenePix file

_A_u_t_h_o_r(_s):

     Agnes Paquet

_S_e_e _A_l_s_o:

     'slideQuality', 'gpQuality', 'globalQuality'

_E_x_a_m_p_l_e_s:

     datadir <- system.file("gprQCData", package="arrayQuality")
     if (interactive())
     gprData <- readGPR(fnames="9Mm137.gpr", path=datadir)

