RTNsurvival-package |
Performs survival analysis using transcriptional networks inferred by the RTN package. |
dualCoxTable |
Cox regression analysis for dual regulons |
dualSurvivalPanel |
Panel plot of regulons in a inferred dual |
dualSurvivalPanel-method |
Panel plot of regulons in a inferred dual |
RTNsurvival |
Performs survival analysis using transcriptional networks inferred by the RTN package. |
survival.data |
A pre-processed dataset for demonstration purposes only. |
TNS |
TNS: An S4 class for survival survival analysis using transcriptional networks inferred by the RTN package. |
TNS-class |
TNS: An S4 class for survival survival analysis using transcriptional networks inferred by the RTN package. |
tnsCox |
Cox regression analysis for TNS class objects. |
tnsCox-method |
Cox regression analysis for TNS class objects. |
tnsGet |
Get information from slots in a TNS object |
tnsGet-method |
Get information from slots in a TNS object |
tnsGSEA2 |
2-tailed Gene Set Enrichment Analysis on Transcriptional Networks. |
tnsGSEA2-method |
2-tailed Gene Set Enrichment Analysis on Transcriptional Networks. |
tnsKM |
Kaplan-Meier analysis for TNS class objects. |
tnsKM-method |
Kaplan-Meier analysis for TNS class objects. |
tnsPlotGSEA2 |
Plot 2-tailed GSEA for a sample from a TNS |
tnsPreprocess |
Preprocessing of TNS class objects. |
tnsPreprocess-method |
Preprocessing of TNS class objects. |