ec2reaction {transomics2cytoscape} | R Documentation |
Convert KEGG enzyme IDs to KEGG reaction IDs
ec2reaction(tsvFilePath, columnIndex, outputFilename)
tsvFilePath |
Path of a TSV file with the 9 columns (layer index of a source node, name or KEGG object ID that the source node should have, layer index of a target node, name or KEGG object ID that the target node should have, interaction type). |
columnIndex |
The column number |
outputFilename |
The output filename |
None
Kozo Nishida
## Not run: ec = system.file("extdata", "allosteric_ecnumber.tsv", package = "transomics2cytoscape") ec2reaction(ec, 8, "allosteric.tsv") ## End(Not run)