plotIndividual_Tracks {sojourner} | R Documentation |
Plot individual tracks one by one, with grid layout. Tracks are sorted by their lengths.
plotIndividual_Tracks(trackll=trackll,grid.size=c(1000,1000), resolution=0.107,t.interval=0.5)
trackll |
trajectory list generated by createTrackll() and processing. |
grid.size |
The size of each plot grid in nanometers. Default 1000 nm for x and y axis, respectively. |
resolution |
ratio of pixel to uM. |
t.interval |
Time interval for image aquisition. Default 0.5 sec (500ms). |
Plot individual track/trajectory one by one, and the tracks will be layout in 15X8 grids.
PDF: One PDF file with 120 tracks on each page.
# Generate trackll, and process, # e.g. mask region of interest, tracks from multiple files should not be # merged. folder=system.file('extdata','HSF',package='sojourner') trackll=createTrackll(folder=folder, input=3) trackll=filterTrack(trackll,filter=c(7,Inf)) trackll=maskTracks(folder,trackll) trackll=mergeTracks(folder, trackll) # Plot individual tracks, plotIndividual_Tracks(trackll,grid.size=c(1000,1000),resolution=0.107, t.interval=0.5)