scranModelGeneVar {singleCellTK} | R Documentation |
scranModelGeneVar Generates and stores variability data from scran::modelGeneVar in the input singleCellExperiment object
scranModelGeneVar(inSCE, assayName)
inSCE |
a singleCellExperiment object |
assayName |
selected assay to compute variable features from |
inSCE updated singleCellExperiment object that contains variable feature metrics in rowData
Irzam Sarfraz
data(sce_chcl, package = "scds") sce_chcl <- scranModelGeneVar(sce_chcl, "counts")