WritesigFeature {sigFeature} | R Documentation |
This function will write the output data produce from the function sigFeatureRanking.enfold.
WritesigFeature(results, x, fileName="Result")
results |
the object produce by the function named sigFeatureRanking.enfold |
x |
n-by-d data matrix to train (n chips/patients, d clones/genes). |
fileName |
name of the output file. |
This function will write the variables.
results output file.
Pijush Das <topijush@gmail.comn>, et al.
Becker, N., Werft, W., Toedt, G., Lichter, P. and Benner, A.(2009) PenalizedSVM: a R-package for feature selection SVM classification, Bioinformatics, 25(13),p 1711-1712
predict.penSVM, svm (in package e1071)
#Example for WritesigFeature() #Data set taken from GSE2280 library(SummarizedExperiment) data(ExampleRawData, package="sigFeature") x <- t(assays(ExampleRawData)$counts) y <- colData(ExampleRawData)$sampleLabels #For 10 fold cross validation. #results = sigFeature.enfold(x,y,"kfold",10) #to write the output #data(results) #WritesigFeature(results, x)