loadPWs {pwOmics}R Documentation

Load pathway database information.

Description

This function loads the pathway information from pathway databases. Needed in the identifyPWs function.

Usage

loadPWs(pwdatabases, biopax_level)

Arguments

pwdatabases

vector indicating with which pathway database the pathways should be determined; possible choices are "biocarta", "kegg", "nci", "reactome".

biopax_level

integer indicating biopax level of pathway database information to be retrieved.

Value

list of biopax model corresponding to specified pathway databases.


[Package pwOmics version 1.24.0 Index]