upsetTimeCoverage {pulsedSilac} | R Documentation |
How many proteins/peptides are detected in each sample. Anything else than NA is considered detected.
upsetTimeCoverage(x, ...) ## S4 method for signature 'SilacProteinExperiment' upsetTimeCoverage( x, assayName, conditionCol, maxMissing = 0, returnList = FALSE, ... ) ## S4 method for signature 'SilacPeptideExperiment' upsetTimeCoverage( x, assayName, maxMissing = 0, conditionCol, returnList = FALSE, ... ) ## S4 method for signature 'SilacProteomicsExperiment' upsetTimeCoverage( x, assayName, maxMissing = 0, conditionCol, returnList = FALSE, ... )
x |
A |
... |
Further arguments passed to |
assayName |
Name of the assay to use in the plot. |
conditionCol |
A |
maxMissing |
A |
returnList |
A |
A barplot or a data.frame
.
data('wormsPE') upsetTimeCoverage(x = ProtExp(wormsPE), assayName = 'ratio', maxMissing = 2)