tile_by_windows {methylSig} | R Documentation |
An optional function to aggregate cytosine / CpG level data into regions based on a tiling of the genome by win_size
.
tile_by_windows(bs, win_size = 200)
bs |
a |
win_size |
an |
A BSseq
object with loci consisting of a tiling of the genome by win_size
bp tiles. Coverage and methylation read count matrices are aggregated by the sums of the cytosines / CpGs in the regions per sample.
data(bsseq_stranded, package = 'methylSig') tiled = tile_by_windows(bs = bsseq_stranded, win_size = 50)