compute_perturbed_genes {mdp}R Documentation

Compute perturbed genes Find the top fraction of genes that are more perturbed in test versus controls

Description

Compute perturbed genes Find the top fraction of genes that are more perturbed in test versus controls

Usage

compute_perturbed_genes(gmdp_results, control_lab, fraction_genes)

Arguments

gmdp_results

results table of gene scores

control_lab

label specificying control class

fraction_genes

fraction of top perturbed genes that will make the set of perturbed genes

Value

vector of perturbed genes


[Package mdp version 1.12.0 Index]