installCellPicker {imageHTS} | R Documentation |
installCellPicker
and installWebQuery
install the
cellPicker and webQuery modules in the local project directory.
cellPicker
is a web application that allows the interactive
selection/annotation of cells within images using a point-and-click web
interface.
webQuery
is a web application that allows to query
information from the screen by well and well annotation. The
webQuery module requires a web server and PHP to be installed.
installCellPicker(x) installWebQuery(x)
x |
An imageHTS object. |
After installation, the cellPicker module can be used with the
function popCellPicker
.
x
must be annotated using annotate
before using
installWebQuery
. After installation, the webQuery module
can be used with the function popWebQuery
.
None.
Gregoire Pau, gregoire.pau@embl.de, 2010
## initialize imageHTS object using the local submorph screen local = tempdir() server = system.file('submorph', package='imageHTS') x = parseImageConf('conf/imageconf.txt', localPath=local, serverURL=server) x = annotate(x, 'conf/annotation.txt') installCellPicker(x) installWebQuery(x)