plot_corr {iCOBRA} | R Documentation |
Plot correlations between observations and a continuous truth value.
plot_corr( cobraplot, title = "", stripsize = 15, titlecol = "black", pointsize = 5, xaxisrange = c(-1, 1), corrtype = "pearson" )
cobraplot |
A |
title |
A character string giving the title of the plot. |
stripsize |
A numeric value giving the size of the strip text, when the results are stratified by an annotation. |
titlecol |
A character string giving the color of the title. |
pointsize |
A numeric value giving the size of the plot characters. |
xaxisrange |
A numeric vector with two elements, giving the lower and upper boundary of the x-axis, respectively. |
corrtype |
A character string giving the type of correlation to show. Either "pearson" or "spearman". |
A ggplot object
Charlotte Soneson
data(cobradata_example) cobraperf <- calculate_performance(cobradata_example, cont_truth = "logFC", aspects = "corr") cobraplot <- prepare_data_for_plot(cobraperf, colorscheme = "Dark2", incltruth = TRUE) plot_corr(cobraplot, corrtype = "spearman")